Longbow: A Lightweight Remote Job Submission ToolGebbie-Rayet et al.Jan 27, 20164(1): e1DownloadXML (English)PDF (English)Jan 27, 20164(1): e1
Free and Open-source Control Software for 3-D Motion and ProcessingWijnen et al.Jan 27, 20164(1): e2DownloadXML (English)PDF (English)Jan 27, 20164(1): e2
Pendent_Drop: An ImageJ Plugin to Measure the Surface Tension from an Image of a Pendent DropDaerr & MogneJan 28, 20164(1): e3DownloadXML (English)PDF (English)Jan 28, 20164(1): e3
Vespucci: A Free, Cross-Platform Tool for Spectroscopic Data Analysis and ImagingFoose & SizemoreJan 29, 20164(1): e4DownloadXML (English)PDF (English)Jan 29, 20164(1): e4
ScatterJn: An ImageJ Plugin for Scatterplot-Matrix Analysis and Classification of Spatially Resolved Analytical Microscopy DataZeitvogel & ObstFeb 3, 20164(1): e5DownloadXML (English)PDF (English)Feb 3, 20164(1): e5
MATH: A Scientific Tool for Numerical Methods Calculation and VisualizationGlaser-Opitz & BudajováFeb 10, 20164(1): e6DownloadXML (English)PDF (English)Feb 10, 20164(1): e6
ecg-kit: a Matlab Toolbox for Cardiovascular Signal ProcessingDemski & Llamedo SoriaApr 4, 20164(1): e8DownloadXML (English)PDF (English)Apr 4, 20164(1): e8
DataExplore: An Application for General Data Analysis in Research and EducationFarrellMar 22, 20164(1): e9DownloadXML (English)PDF (English)Mar 22, 20164(1): e9
Benthic Photo Survey: Software for Geotagging, Depth-tagging, and Classifying Photos from Survey Data and Producing Shapefiles for Habitat Mapping in GISKibeleMar 23, 20164(1): e10DownloadXML (English)PDF (English)Mar 23, 20164(1): e10
VIGoR: Variational Bayesian Inference for Genome-Wide RegressionOnogi & IwataApr 4, 20164(1): e11DownloadXML (English)PDF (English)Apr 4, 20164(1): e11
Perprof-py: A Python Package for Performance Profile of Mathematical Optimization SoftwareSoares Siqueira et al.Apr 22, 20164(1): e12DownloadXML (English)PDF (English)Apr 22, 20164(1): e12
Moosh: A Numerical Swiss Army Knife for the Optics of Multilayers in Octave/MatlabDefrance et al.Apr 22, 20164(1): e13DownloadXML (English)PDF (English)Apr 22, 20164(1): e13
eofs: A Library for EOF Analysis of Meteorological, Oceanographic, and Climate DataDawsonApr 26, 20164(1): e14DownloadXML (English)PDF (English)Apr 26, 20164(1): e14
CowLog – Cross-Platform Application for Coding Behaviours from VideoPastellApr 27, 20164(1): e15DownloadXML (English)PDF (English)Apr 27, 20164(1): e15
Manual Whisker Annotator (MWA): A Modular Open-Source ToolHewitt et al.Apr 28, 20164(1): e16DownloadXML (English)PDF (English)Apr 28, 20164(1): e16
MiToBo - A Toolbox for Image Processing and AnalysisMöller et al.Apr 28, 20164(1): e17DownloadXML (English)PDF (English)Apr 28, 20164(1): e17
PerfAndPubTools – Tools for Software Performance Analysis and Publishing of ResultsFachada et al.May 12, 20164(1): e18DownloadXML (English)PDF (English)May 12, 20164(1): e18
SeFo: A Package for Generating Probabilistic Forecasts from NMME Predictive EnsemblesKrakauerMay 20, 20164(1): e19DownloadXML (English)PDF (English)May 20, 20164(1): e19
OutlierFlag: A Tool for Scientific Data Quality Control by Outlier Data FlaggingHuang et al.May 31, 20164(1): e20DownloadXML (English)PDF (English)May 31, 20164(1): e20
Open Source Software for Mapping Human Impacts on Marine Ecosystems with an Additive ModelStockJun 7, 20164(1): e21DownloadXML (English)PDF (English)Jun 7, 20164(1): e21
PyVDT: A PsychoPy-Based Visual Sequence Detection TaskHansenJun 10, 20164(1): e22DownloadXML (English)PDF (English)Jun 10, 20164(1): e22
Particle Data Management Software for 3DParticle Tracking Velocimetry and Related Applications – The Flowtracks PackageMeller & LiberzonJun 16, 20164(1): e23DownloadXML (English)PDF (English)Jun 16, 20164(1): e23
The Python ARM Radar Toolkit (Py-ART), a Library for Working with Weather Radar Data in the Python Programming LanguageHelmus & CollisJul 18, 20164(1): e25DownloadXML (English)PDF (English)Jul 18, 20164(1): e25
Parchar – Characterization of Suspended Particles Through Image Processing in MatlabMarkussenJul 19, 20164(1): e26DownloadXML (English)PDF (English)Jul 19, 20164(1): e26
KAMG: A Tool for Converting Blood Ties and Affinity Ties into Adjacency MatricesXiong et al.Jul 19, 20164(1): e28DownloadXML (English)PDF (English)Jul 19, 20164(1): e28
Webcharts – A Web-based Charting Library for Custom Interactive Data VisualizationBryant & WildfireJul 19, 20164(1): e29DownloadXML (English)PDF (English)Jul 19, 20164(1): e29
Efficient n-gram, Skipgram and Flexgram Modelling with Colibri Corevan Gompel & van den BoschAug 2, 20164(1): e30DownloadXML (English)PDF (English)Aug 2, 20164(1): e30
Windspharm: A High-Level Library for Global Wind Field Computations Using Spherical HarmonicsDawsonAug 2, 20164(1): e31DownloadXML (English)PDF (English)Aug 2, 20164(1): e31
Flow Rates in Liquid Chromatography, Gas Chromatography and Supercritical Fluid Chromatography: A Tool for OptimizationMeursAug 2, 20164(1): e32DownloadXML (English)PDF (English)Aug 2, 20164(1): e32
WekaPyScript: Classification, Regression, and Filter Schemes for WEKA Implemented in PythonBeckham et al.Aug 8, 20164(1): e33DownloadXML (English)PDF (English)Aug 8, 20164(1): e33
The Langevin Approach: An R Package for Modeling Markov ProcessesRinn et al.Aug 23, 20164(1): e34DownloadXML (English)PDF (English)Aug 23, 20164(1): e34
An Open Framework for the Reproducible Study of the Iterated Prisoner’s DilemmaKnight et al.Aug 31, 20164(1): e35DownloadXML (English)PDF (English)Aug 31, 20164(1): e35
Caliko: An Inverse Kinematics Software Library Implementation of the FABRIK AlgorithmLansley et al.Sep 9, 20164(1): e36DownloadXML (English)PDF (English)Sep 9, 20164(1): e36
SimOutUtils – Utilities for Analyzing Time Series Simulation OutputFachada et al.Oct 21, 20164(1): e38DownloadPDF (English)XML (English)Oct 21, 20164(1): e38
Nansat: a Scientist-Orientated Python Package for Geospatial Data ProcessingKorosov et al.Oct 24, 20164(1): e39DownloadXML (English)PDF (English)Oct 24, 20164(1): e39
EDI – A Template-Driven Metadata Editor for Research DataPavesi et al.Oct 25, 20164(1): e40DownloadPDF (English)XML (English)Oct 25, 20164(1): e40
Virtual Micromagnetics: A Framework for Accessible and Reproducible Micromagnetic SimulationVousden et al.Oct 31, 20164(1): e41DownloadPDF (English)XML (English)Oct 31, 20164(1): e41
MatCal: Open Source Bayesian 14C Age Calibration in MatlabLougheed & ObrochtaNov 8, 20164(1): e42DownloadXML (English)PDF (English)Nov 8, 20164(1): e42
prepdat- An R Package for Preparing Experimental Data for Statistical AnalysisAllon & LuriaNov 25, 20164(1): e43DownloadPDF (English)XML (English)Nov 25, 20164(1): e43
eAnalytics: Dynamic Web-based Analytics for the Energy IndustryGovanNov 30, 20164(1): e45DownloadXML (English)PDF (English)Nov 30, 20164(1): e45
Report on the Second Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE2)Katz et al.Collection: Working towards Sustainable Software for Science: Practice and Experiences (WSSSPE2)Feb 22, 20164(1): e7DownloadXML (English)PDF (English)Feb 22, 20164(1): e7
Channeling Community Contributions to Scientific Software: A Sprint ExperienceCrusoe & BrownJul 19, 20164(1): e27DownloadXML (English)PDF (English)Jul 19, 20164(1): e27
Report on the Third Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE3)Katz et al.Oct 21, 20164(1): e37DownloadXML (English)PDF (English)Oct 21, 20164(1): e37
Walking the Talk: Adopting and Adapting Sustainable Scientific Software Development processes in a Small Biology LabCrusoe & BrownNov 29, 20164(1): e44DownloadPDF (English)XML (English)Nov 29, 20164(1): e44
Correction: MurCSS: A Tool for Standardized Evaluation of Decadal Hindcast SystemsIlling et al.Jun 24, 20164(1): e24DownloadXML (English)PDF (English)Jun 24, 20164(1): e24