Software MetapapersImage Enhancer: A Graphic Editor to Apply Numerous Effects in Digital ImageAbhisek HazraDec 11, 20142(1): e31DownloadXML (English)PDF (English)Dec 11, 20142(1): e31
Software MetapapersPIVlab – Towards User-friendly, Affordable and Accurate Digital Particle Image Velocimetry in MATLABWilliam Thielicke, Eize J. StamhuisOct 16, 20142(1): e30DownloadXML (English)PDF (English)Oct 16, 20142(1): e30
Software MetapapersMagni: A Python Package for Compressive Sampling and Reconstruction of Atomic Force Microscopy ImagesChristian Schou Oxvig, Patrick Steffen Pedersen, Thomas Arildsen, Jan Østergaard, Torben LarsenOct 7, 20142(1): e29DownloadXML (English)PDF (English)Oct 7, 20142(1): e29
Software MetapapersPyRDM: A Python-based library for automating the management and online publication of scientific software and dataChristian T. Jacobs, Alexandros Avdis, Gerard J. Gorman, Matthew D. PiggottOct 3, 20142(1): e28DownloadXML (English)PDF (English)Oct 3, 20142(1): e28
Software MetapapersAn Open-source Toolbox for Analysing and Processing PhysioNet Databases in MATLAB and OctaveIkaro Silva, George MoodySep 24, 20142(1): e27DownloadXML (English)PDF (English)Sep 24, 20142(1): e27
Software Metapaperspyparty: Intuitive Particle Processing in PythonAdam S HughesSep 23, 20142(1): e26DownloadXML (English)PDF (English)Sep 23, 20142(1): e26
Software MetapapersCHLOE: A Software Tool for Automatic Novelty Detection in Microscopy Image DatasetsSaundra Manning, Lior ShamirSep 22, 20142(1): e25DownloadXML (English)PDF (English)Sep 22, 20142(1): e25
Software MetapapersMurCSS: A Tool for Standardized Evaluation of Decadal Hindcast SystemsSebastian Illing, Christopher Kadow, Kunst Oliver, Ulrich CubaschSep 4, 20142(1): e24DownloadXML (English)PDF (English)Sep 4, 20142(1): e24
Software MetapapersHistorical Post Office Directory Parser (POD Parser) Software From the AddressingHistory ProjectNicola Osborne, George Hamilton, Stuart MacdonaldJul 21, 20142(1): e23DownloadXML (English)PDF (English)Jul 21, 20142(1): e23
Issues in Research SoftwareMINRES-QLP Pack and Reliable Reproducible Research via Supportable Scientific SoftwareSou-Cheng Terrya ChoiCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e22DownloadXML (English)PDF (English)Jul 9, 20142(1): e22
Issues in Research SoftwareBest Practices for Computational Science: Software Infrastructure and Environments for Reproducible and Extensible ResearchVictoria Stodden, Sheila MiguezCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e21DownloadXML (English)PDF (English)Jul 9, 20142(1): e21
Issues in Research SoftwareTransitive Credit as a Means to Address Social and Technological Concerns Stemming from Citation and Attribution of Digital ProductsDaniel S. KatzCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e20DownloadXML (English)PDF (English)Jul 9, 20142(1): e20
Issues in Research SoftwarenanoHUB.org: Experiences and Challenges in Software Sustainability for a Large Scientific CommunityLynn Zentner, Michael Zentner, Victoria Farnsworth, Michael McLennan, Krishna Madhavan, Gerhard KlimeckCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e19DownloadXML (English)PDF (English)Jul 9, 20142(1): e19
Issues in Research SoftwareThe Big Effects of Short-term Efforts: Mentorship and Code Integration in Open Source Scientific SoftwareErik H Trainer, Chalalai Chaihirunkarn, James D HerbslebCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e18DownloadXML (English)PDF (English)Jul 9, 20142(1): e18
Issues in Research SoftwareA Scientist’s Perspective on Sustainable Scientific SoftwareBrian Blanton, Chris LenhardtCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e17DownloadXML (English)PDF (English)Jul 9, 20142(1): e17
Issues in Research SoftwareSimplifying the Development, Use and Sustainability of HPC SoftwareJeremy Cohen, Chris Cantwell, Neil Chue Hong, David Moxey, Malcolm Illingworth, Andrew Turner, John Darlington, Spencer SherwinCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e16DownloadXML (English)PDF (English)Jul 9, 20142(1): e16
Issues in Research SoftwareData Management Lifecycle and Software Lifecycle Management in the Context of Conducting ScienceW Christopher Lenhardt, Stanley Ahalt, Brian Blanton, Laura Christopherson, Ray IdaszakCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e15DownloadXML (English)PDF (English)Jul 9, 20142(1): e15
Issues in Research SoftwareSoftware Abstractions and Methodologies for HPC Simulation Codes on Future ArchitecturesAnshu Dubey, Steve R Brandt, Richard Brower, Merle Giles, Paul Hovland, Donald Q Lamb, Frank Löffler, Boyana Norris, Brian W O'Shea, Claudio Rebbi, Marc Snir, Rajeev Thakur, Petros TzeferacosCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e14DownloadXML (English)PDF (English)Jul 9, 20142(1): e14
Issues in Research SoftwareA Framework for Discussing e-Research Infrastructure SustainabilityDaniel S Katz, David ProctorCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e13DownloadXML (English)PDF (English)Jul 9, 20142(1): e13
Issues in Research SoftwareCactus: Issues for Sustainable Simulation SoftwareFrank Löffler, Steven R Brandt, Gabrielle Allen, Erik SchnetterCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e12DownloadXML (English)PDF (English)Jul 9, 20142(1): e12
Issues in Research SoftwareFourteen Years of R/qtl: Just Barely SustainableKarl W BromanCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e11DownloadXML (English)PDF (English)Jul 9, 20142(1): e11
Issues in Research SoftwareContinuous Integration for Concurrent Computational Framework and Application DevelopmentDerek R Gaston, John W Peterson, Cody J Permann, David Andrs, Andrew E Slaughter, Jason M MillerCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e10DownloadXML (English)PDF (English)Jul 9, 20142(1): e10
Issues in Research SoftwareExtensible Generic Data Management SoftwareReagan W Moore, Arcot Rajasekar, Hao XuCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e9DownloadXML (English)PDF (English)Jul 9, 20142(1): e9
Issues in Research SoftwareThe Blind Men and the Elephant: Towards an Empirical Evaluation Framework for Software SustainabilityColin C Venters, Lydia Lau, Michael K Griffiths, Violeta Holmes, Rupert R Ward, Caroline Jay, Charlie E Dibsdale, Jie XuCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e8DownloadXML (English)PDF (English)Jul 9, 20142(1): e8
Issues in Research SoftwareExperiences from Software Engineering of Large Scale AMR Multiphysics Code FrameworksAnshu Dubey, Brian Van StraalenCollection: Working towards Sustainable Software for Science: Practice and ExperiencesJul 9, 20142(1): e7DownloadXML (English)PDF (English)Jul 9, 20142(1): e7