Articles

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  Issues in Research Software

  A Framework for Discussing e-Research Infrastructure Sustainability

  Daniel Katz, David Proctor

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e13
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  Issues in Research Software

  Cactus: Issues for Sustainable Simulation Software

  
  

  Frank Löffler, Steven Brandt, Gabrielle Allen, Erik Schnetter

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e12
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  Issues in Research Software

  Fourteen Years of R/qtl: Just Barely Sustainable

  
  

  Karl Broman

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e11
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  Issues in Research Software

  Continuous Integration for Concurrent Computational Framework and Application Development

  Derek Gaston, John Peterson, Cody Permann, David Andrs, Andrew Slaughter, Jason Miller

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e10
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  Issues in Research Software

  Extensible Generic Data Management Software

  
  

  Reagan Moore, Arcot Rajasekar, Hao Xu

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e9
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  Issues in Research Software

  The Blind Men and the Elephant: Towards an Empirical Evaluation Framework for Software Sustainability

  Colin Venters, Lydia Lau, Michael Griffiths, Violeta Holmes, Rupert Ward, Caroline Jay, Charlie Dibsdale, Jie Xu

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e8
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  Issues in Research Software

  Experiences from Software Engineering of Large Scale AMR Multiphysics Code Frameworks

  Anshu Dubey, Brian Van Straalen

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e7
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  Issues in Research Software

  Summary of the First Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE1)

  Daniel Katz, Sou-Cheng Choi, Hilmar Lapp, Ketan Maheshwari, Frank Löffler, Matthew Turk, Marcus Hanwell, Nancy Wilkins-Diehr, James Hetherington, James Howison, Shel Swenson, Gabrielle Allen, Anne Elster, Bruce Berriman, Colin Venters

  Special Collection: Working towards Sustainable Software for Science: Practice and Experiences

  • XML (EN)
  • PDF (EN)

  09 Jul 2014

  2 ( 1 ) : e6
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  Software Metapapers

  CARMA: Software for Continuous Affect Rating and Media Annotation

  Jeffrey Girard

  • XML (EN)
  • PDF (EN)

  03 Jul 2014

  2 ( 1 ) : e5
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  Software Metapapers

  Scientific Visualisation of Atmospheric Data with ParaView

  Martin Jucker

  • XML (EN)
  • PDF (EN)

  03 Jun 2014

  2 ( 1 ) : e4
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  Software Metapapers

  Computerized Testing Software for Assessing Interference Suppression in Children and Adults: The Bivalent Shape Task (BST)

  Shane Mueller, Alena Esposito

  • XML (EN)
  • PDF (EN)

  23 May 2014

  2 ( 1 ) : e3
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  Software Metapapers

  LIIS: A web-based system for culture collections and sample annotation

  Matthew Forster, Lyn Paterson, Robert Forster

  • XML (EN)
  • PDF (EN)

  08 Apr 2014

  2 ( 1 ) : e2
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  Software Metapapers

  AvoPlot: An extensible scientific plotting tool based on matplotlib

  Nial Peters

  • XML (EN)
  • PDF (EN)

  10 Feb 2014

  2 ( 1 ) : e1
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  Software Metapapers

  MPWide: a light-weight library for efficient message passing over wide area networks

  Derek Groen, Steven Rieder, Simon Portegies Zwart

  • XML (EN)
  • PDF (EN)

  20 Dec 2013

  1 ( 1 ) : e9
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  Software Metapapers

  Madagascar: open-source software project for multidimensional data analysis and reproducible computational experiments

  Sergey Fomel, Paul Sava, Ioan Vlad, Yang Liu, Vladimir Bashkardin

  • XML (EN)
  • PDF (EN)

  21 Nov 2013

  1 ( 1 ) : e8
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  Software Metapapers

  Feature Usage Explorer: Usage Monitoring and Visualization Tool in HTML5 Based Applications

  Sarunas Marciuska, Pekka Abrahamsson

  • XML (EN)
  • PDF (EN)

  18 Oct 2013

  1 ( 1 ) : e7
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  Software Metapapers

  IJBlob: An ImageJ Library for Connected Component Analysis and Shape Analysis

  Thorsten Wagner, Hans-Gerd Lipinski

  • XML (EN)
  • PDF (EN)

  14 Oct 2013

  1 ( 1 ) : e6
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  Software Metapapers

  OACoder: Postcode Coding Tool

  
  

  Muhammad Adnan, Alex Singleton, Paul Longley

  • XML (EN)
  • PDF (EN)

  08 Oct 2013

  1 ( 1 ) : e5
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  Software Metapapers

  A Web-based modeling tool for the SEMAT Essence theory of software engineering

  Daniel Graziotin, Pekka Abrahamsson

  • XML (EN)
  • PDF (EN)

  02 Sep 2013

  1 ( 1 ) : e4
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  Software Metapapers

  Mahotas: Open source software for scriptable computer vision

  Luis Pedro Coelho

  • XML (EN)
  • PDF (EN)

  29 Jul 2013

  1 ( 1 ) : e3
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  Software Metapapers

  Drosophila Photo-transduction Simulator

  
  

  Konstantin Nikolic, Joaquim Loizu

  • XML (EN)
  • PDF (EN)

  14 Apr 2013

  1 ( 1 ) : e1
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  Software Metapapers

  ExpTimer: timer software to facilitate complex, multi-step procedures

  Laura Luyten, Frederik Van Cappellen

  • XML (EN)
  • PDF (EN)

  14 Apr 2013

  1 ( 1 ) : e2