Articles

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  Software Metapapers

  BayesTwin: An R Package for Bayesian Inference of Item-Level Twin Data

  Inga   Schwabe

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  14 Nov 2017

  5 ( 1 ) : 33
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  Issues in Research Software

  Reproducibility in Research: Systems, Infrastructure, Culture

  Tom   Crick ,  Benjamin   Hall ,  Samin   Ishtiaq

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  09 Nov 2017

  5 ( 1 ) : 32
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  Software Metapapers

  ImageSURF: An ImageJ Plugin for Batch Pixel-Based Image Segmentation Using Random Forests

  Aidan   O'Mara ,  Anna E.   King ,  James C.   Vickers ,  Matthew T. K.   Kirkcaldie

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  06 Nov 2017

  5 ( 1 ) : 31
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  Software Metapapers

  Jug: Software for Parallel Reproducible Computation in Python

  Luis Pedro   Coelho

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  • XML (EN)

  27 Oct 2017

  5 ( 1 ) : 30
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  Software Metapapers

  OpenOpticalFlow: An Open Source Program for Extraction of Velocity Fields from Flow Visualization Images

  Tianshu   Liu

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  • XML (EN)

  20 Oct 2017

  5 ( 1 ) : 29
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  Software Metapapers

  DSCImageCalc – Software for Determining Similarity Coefficients for the Analysis of Image Segmentations

  Tom   Lawton

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  • XML (EN)

  18 Oct 2017

  5 ( 1 ) : 28
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  Software Metapapers

  GIFT-Grab: Real-time C++ and Python multi-channel video capture, processing and encoding API

  Dzhoshkun Ismail   Shakir ,  Luis Carlos   García-Peraza-Herrera ,  Pankaj   Daga ,  Tom   Doel ,  Matthew J.   Clarkson ,  Sébastien   Ourselin ,  Tom   Vercauteren

  • PDF (EN)
  • XML (EN)

  09 Oct 2017

  5 ( 1 ) : 27
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  Software Metapapers

  The Giles Ecosystem – Storage, Text Extraction, and OCR of Documents

  Julia   Damerow ,  B. R. Erick   Peirson ,  Manfred D.   Laubichler

  • PDF (EN)
  • XML (EN)

  28 Sep 2017

  5 ( 1 ) : 26
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  Software Metapapers

  ATUS-Commuting: Stata Code to Calculate Commuting Time in the American Time Use Survey

  Gray   Kimbrough

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  • XML (EN)

  25 Sep 2017

  5 ( 1 ) : 25
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  Software Metapapers

  GENESIS – The GENEric SImulation System for Modelling State Transitions

  Matthew S.   Gillman

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  • XML (EN)

  20 Sep 2017

  5 ( 1 ) : 24
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  Software Metapapers

  VScope — Data Acquisition and Analysis for Voltage-sensitive Dye Imaging Using Multiple Cameras and Electrophysiology

  Daniel A.   Wagenaar

  • PDF (EN)
  • XML (EN)

  13 Sep 2017

  5 ( 1 ) : 23
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  Software Metapapers

  Picasso: A Modular Framework for Visualizing the Learning Process of Neural Network Image Classifiers

  Ryan   Henderson ,  Rasmus   Rothe

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  • XML (EN)

  11 Sep 2017

  5 ( 1 ) : 22
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  Software Metapapers

  Xanthos – A Global Hydrologic Model

  
  

  Xinya   Li ,  Chris R.   Vernon ,  Mohamad I.   Hejazi ,  Robert P.   Link ,  Leyang   Feng ,  Yaling   Liu ,  Lynn T.   Rauchenstein

  • PDF (EN)
  • XML (EN)

  11 Sep 2017

  5 ( 1 ) : 21
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  Software Metapapers

  Web Tool for Navigating and Plotting SomaLogic ADAT Files

  Foo   Cheung ,  Giovanna   Fantoni ,  Maria   Conner ,  Brian A.   Sellers ,  Yuri   Kotliarov ,  Julián   Candia ,  Katherine   Stagliano ,  Angélique   Biancotto

  • PDF (EN)
  • XML (EN)

  08 Sep 2017

  5 ( 1 ) : 20
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  Software Metapapers

  NeuroCharter: A Neural Networks Software to Visually Discover the Effects and Contributions between Interrelated Features

  Mohammad N.   Elnesr ,  A. A.   Alazba

  • PDF (EN)
  • XML (EN)

  04 Sep 2017

  5 ( 1 ) : 19
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  Software Metapapers

  HydroCloud: A Web Application for Exploring Stream Gage Data

  Martin C.   Roberge ,  Michael P.   McGuire ,  Jie   Lian

  • PDF (EN)
  • XML (EN)

  23 Aug 2017

  5 ( 1 ) : 18
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  Software Metapapers

  VaMpy: A Python Package to Solve 1D Blood Flow Problems

  Alexandra K.   Diem ,  Neil W.   Bressloff

  • PDF (EN)
  • XML (EN)

  08 Jun 2017

  5 ( 1 ) : 17
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  Software Metapapers

  ML-Ask: Open Source Affect Analysis Software for Textual Input in Japanese

  Michal   Ptaszynski ,  Pawel   Dybala ,  Rafal   Rzepka ,  Kenji   Araki ,  Fumito   Masui

  • PDF (EN)
  • XML (EN)

  07 Jun 2017

  5 ( 1 ) : 16
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  Software Metapapers

  DifferentialEquations.jl – A Performant and Feature-Rich Ecosystem for Solving Differential Equations in Julia

  Christopher   Rackauckas ,  Qing   Nie

  • PDF (EN)
  • XML (EN)

  25 May 2017

  5 ( 1 ) : 15
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  Software Metapapers

  Teetool -- a probabilistic trajectory analysis tool

  
  

  Willem   Eerland ,  Simon   Box ,  Hans   Fangohr ,  András   Sóbester

  • XML (EN)
  • PDF (EN)

  17 May 2017

  5 ( 1 ) : 14
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  Software Metapapers

  MEDINA: MECCA Development in Accelerators – KPP Fortran to CUDA source-to-source Pre-processor

  Michail   Alvanos ,  Theodoros   Christoudias

  • XML (EN)
  • PDF (EN)

  28 Apr 2017

  5 ( 1 ) : 13
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  Software Metapapers

  Generalized Sampling in Julia

  
  

  Robert   Dahl Jacobsen ,  Morten   Nielsen ,  Morten   Grud Rasmussen

  • PDF (EN)
  • XML (EN)

  20 Apr 2017

  5 ( 1 ) : 12
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  Software Metapapers

  mma: An R Package for Mediation Analysis with Multiple Mediators

  Qingzhao   Yu ,  Bin   Li

  • PDF (EN)
  • XML (EN)

  12 Apr 2017

  5 ( 1 ) : 11
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  Software Metapapers

  xarray: N-D labeled Arrays and Datasets in Python

  
  

  Stephan   Hoyer ,  Joe   Hamman

  • PDF (EN)
  • XML (EN)

  05 Apr 2017

  5 ( 1 ) : 10
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  Software Metapapers

  preconfig: A Versatile Configuration File Generator for Varying Parameters

  Francois   Nedelec

  • PDF (EN)
  • XML (EN)

  05 Apr 2017

  5 ( 1 ) : 9