Articles

• 
  Issues in Research Software

  Fourth Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE4)

  Daniel S. Katz, Kyle E. Niemeyer, Sandra Gesing, Lorraine Hwang, Wolfgang Bangerth, Simon Hettrick, Ray Idaszak, Jean Salac, Neil Chue Hong, Santiago Núñez-Corrales, Alice Allen, R. Stuart Geiger, Jonah Miller, Emily Chen, Anshu Dubey, Patricia Lago

  • PDF (EN)
  • XML (EN)

  15 Feb 2018

  6 ( 1 ) : 10
• 
  Software Metapapers

  Tethys – A Python Package for Spatial and Temporal Downscaling of Global Water Withdrawals

  Xinya Li, Chris R. Vernon, Mohamad I. Hejazi, Robert P. Link, Zhongwei Huang, Lu Liu, Leyang Feng

  • PDF (EN)
  • XML (EN)

  09 Feb 2018

  6 ( 1 ) : 9
• 
  Software Metapapers

  webMUSHRA — A Comprehensive Framework for Web-based Listening Tests

  Michael Schoeffler, Sarah Bartoschek, Fabian-Robert Stöter, Marlene Roess, Susanne Westphal, Bernd Edler, Jürgen Herre

  • PDF (EN)
  • XML (EN)

  05 Feb 2018

  6 ( 1 ) : 8
• 
  Software Metapapers

  PLEASE: The Python Low-energy Electron Analysis SuitE – Enabling Rapid Analysis of LEEM and LEED Data

  Maxwell Grady, Zhongwei Dai, Karsten Pohl

  • PDF (EN)
  • XML (EN)

  05 Feb 2018

  6 ( 1 ) : 7
• 
  Software Metapapers

  A Random-Dot Kinematogram for Web-Based Vision Research

  Sivananda Rajananda, Hakwan Lau, Brian Odegaard

  • XML (EN)
  • PDF (EN)

  27 Jan 2018

  6 ( 1 ) : 6
• 
  Software Metapapers

  pyObs: Open-Source Software for Computer-Assisted Behavioral Observation Coding

  William Griffin

  • XML (EN)
  • PDF (EN)

  26 Jan 2018

  6 ( 1 ) : 5
• 
  Software Metapapers

  PyPSA: Python for Power System Analysis

  
  

  Thomas Brown, Jonas Hörsch, David Schlachtberger

  • PDF (EN)
  • XML (EN)

  16 Jan 2018

  6 ( 1 ) : 4
• 
  Software Metapapers

  Quandle and Biquandle Homology Calculation in R

  
  

  Roger Fenn, Ansgar Wenzel

  • PDF (EN)
  • XML (EN)

  16 Jan 2018

  6 ( 1 ) : 3
• 
  Software Metapapers

  An Octave/MATLAB® Interface for Rapid Processing of SMOS L1C Full Polarization Brightness Temperature

  Pablo Saavedra, Clemens Simmer

  • PDF (EN)
  • XML (EN)

  08 Jan 2018

  6 ( 1 ) : 2
• 
  Software Metapapers

  ConfBuster: Open-Source Tools for Macrocycle Conformational Search and Analysis

  Xavier Barbeau, Antony T. Vincent, Patrick Lagüe

  • PDF (EN)
  • XML (EN)

  08 Jan 2018

  6 ( 1 ) : 1
• 
  Software Metapapers

  BayesTwin: An R Package for Bayesian Inference of Item-Level Twin Data

  Inga Schwabe

  • PDF (EN)
  • XML (EN)

  14 Nov 2017

  5 ( 1 ) : 33
• 
  Issues in Research Software

  Reproducibility in Research: Systems, Infrastructure, Culture

  Tom Crick, Benjamin Hall, Samin Ishtiaq

  • PDF (EN)
  • XML (EN)

  09 Nov 2017

  5 ( 1 ) : 32
• 
  Software Metapapers

  ImageSURF: An ImageJ Plugin for Batch Pixel-Based Image Segmentation Using Random Forests

  Aidan O'Mara, Anna E. King, James C. Vickers, Matthew T. K. Kirkcaldie

  • PDF (EN)
  • XML (EN)

  06 Nov 2017

  5 ( 1 ) : 31
• 
  Software Metapapers

  Jug: Software for Parallel Reproducible Computation in Python

  Luis Pedro Coelho

  • PDF (EN)
  • XML (EN)

  27 Oct 2017

  5 ( 1 ) : 30
• 
  Software Metapapers

  OpenOpticalFlow: An Open Source Program for Extraction of Velocity Fields from Flow Visualization Images

  Tianshu Liu

  • PDF (EN)
  • XML (EN)

  20 Oct 2017

  5 ( 1 ) : 29
• 
  Software Metapapers

  DSCImageCalc – Software for Determining Similarity Coefficients for the Analysis of Image Segmentations

  Tom Lawton

  • PDF (EN)
  • XML (EN)

  18 Oct 2017

  5 ( 1 ) : 28
• 
  Software Metapapers

  GIFT-Grab: Real-time C++ and Python multi-channel video capture, processing and encoding API

  Dzhoshkun Ismail Shakir, Luis Carlos García-Peraza-Herrera, Pankaj Daga, Tom Doel, Matthew J. Clarkson, Sébastien Ourselin, Tom Vercauteren

  • PDF (EN)
  • XML (EN)

  09 Oct 2017

  5 ( 1 ) : 27
• 
  Software Metapapers

  The Giles Ecosystem – Storage, Text Extraction, and OCR of Documents

  Julia Damerow, B. R. Erick Peirson, Manfred D. Laubichler

  • PDF (EN)
  • XML (EN)

  28 Sep 2017

  5 ( 1 ) : 26
• 
  Software Metapapers

  ATUS-Commuting: Stata Code to Calculate Commuting Time in the American Time Use Survey

  Gray Kimbrough

  • PDF (EN)
  • XML (EN)

  25 Sep 2017

  5 ( 1 ) : 25
• 
  Software Metapapers

  GENESIS – The GENEric SImulation System for Modelling State Transitions

  Matthew S. Gillman

  • PDF (EN)
  • XML (EN)

  20 Sep 2017

  5 ( 1 ) : 24
• 
  Software Metapapers

  VScope — Data Acquisition and Analysis for Voltage-sensitive Dye Imaging Using Multiple Cameras and Electrophysiology

  Daniel A. Wagenaar

  • PDF (EN)
  • XML (EN)

  13 Sep 2017

  5 ( 1 ) : 23
• 
  Software Metapapers

  Picasso: A Modular Framework for Visualizing the Learning Process of Neural Network Image Classifiers

  Ryan Henderson, Rasmus Rothe

  • PDF (EN)
  • XML (EN)

  11 Sep 2017

  5 ( 1 ) : 22
• 
  Software Metapapers

  Xanthos – A Global Hydrologic Model

  
  

  Xinya Li, Chris R. Vernon, Mohamad I. Hejazi, Robert P. Link, Leyang Feng, Yaling Liu, Lynn T. Rauchenstein

  • PDF (EN)
  • XML (EN)

  11 Sep 2017

  5 ( 1 ) : 21
• 
  Software Metapapers

  Web Tool for Navigating and Plotting SomaLogic ADAT Files

  Foo Cheung, Giovanna Fantoni, Maria Conner, Brian A. Sellers, Yuri Kotliarov, Julián Candia, Katherine Stagliano, Angélique Biancotto

  • PDF (EN)
  • XML (EN)

  08 Sep 2017

  5 ( 1 ) : 20
• 
  Software Metapapers

  NeuroCharter: A Neural Networks Software to Visually Discover the Effects and Contributions between Interrelated Features

  Mohammad N. Elnesr, A. A. Alazba

  • PDF (EN)
  • XML (EN)

  04 Sep 2017

  5 ( 1 ) : 19